I'm using PBSPro and am trying to use qsub command line to submit a job but can't seem to get the output and error files to be named how I want them. Currently using:
qsub -N ${subjobname_short} \
-o ${path}.o{$PBS_JOBID} -e ${path}.e${PBS_JOBID}
... submission_script.sc
Where $path=fulljobname (i.e. more than 15 characters)
I'm aware that $PBS_JOBID won't be set until after the job is submitted...
Any ideas?
Thanks
The solution I came up with was following the qsub command with a qalter command like so:
jobid=$(qsub -N ${subjobname_short} submission_script.sc)
qalter -o ${path}.o{$jobid} -e ${path}.e${jobid} ${jobid}
This way, PBS Pro does not need to resolve the variables, as it failed to do so in our install (this may be a configuration issue)
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